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Avogadro

Avogadro - 0.8.1

intuitive molecular editor / visualization

All Time: Not rated (0.0)
Version 0.8.1: Not rated (0.0)
Selected Version: 0.8.1
Release Date: 2008-06-09
License: Freeware
Downloads (version 0.8.1): 972
Downloads (all versions): 5,935

Information Related to Version:

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Product Description:

Avogadro is a user-friendly molecule builder and editor. It offers flexible rendering and a powerful plugin architecture for developers. The program supports interactive building of molecules with integrated molecular mechanics and a fragment database. Input generation for GAMESS or Gaussian calculations is provided. For visualization, the program supports crystallographic unit cells, isosurfaces and orbitals from Gaussian cubes and OpenDX.

What's new in this version:

  • Orbitals are cleared with the rest of the molecule.
  • Orbitals engine can now display the size of the cube being rendered.
  • AutoOpt tool now displays the energy as it optimizes.
  • Quick render functions added to sphere engine and surface display types.
  • Large speed improvement to the surface rendering.
  • The manipulate tool now works much faster than before.
  • Several bug fixes for the "Insert Fragment..." dialog. Insert smiles available again.
  • More robust adjust hydrogens feature, still not perfect.
  • Improved unit cell dialog.
  • Conformer energies are now displayed.
  • Python extension now searches for system wide scripts too.
  • Gaussian input deck generator now uses extender for preview.
  • Gaussian input deck generator now supports z-matrix output.
  • GAMESS input deck dialog reduced in vertical size to accommodate smaller resolutions.
  • Export of graphics dialog improved.
  • Add engines now adds the engine selected (previous bug caused random engine to be added with name selected).
  • Plugin version bumped to 1.1, will prevent stale plugin files from being loaded.
  • Fixed several possible crashes and added additional checks to improve stability.
  • Many, many bug fixes and small enhancements.

Operating System Requirements:

This product is designed to run on the following operating systems:

  • Mac OS X 10.5 Intel
  • Mac OS X 10.5 PPC
  • Mac OS X 10.4 Intel
  • Mac OS X 10.4 PPC

Additional Requirements:

  • Mac OS X 10.4 PPC
  • Mac OS X 10.3.9
  • Mac OS X 10.4 Intel
  • Mac OS X 10.0
  • Mac OS X 10.1
  • Mac OS X 10.5 PPC
  • Mac OS X 10.2
  • Mac OS X 10.5 Intel
  • Mac OS X 10.3
  • Mac OS Classic

Screenshots:

Avogadro

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Feedback Summary:

Version 0.8.1:
Overall Rating: Not rated (0.0) Features: Not rated (0.0) Support: Not rated (0.0)
Ease of Use: Not rated (0.0) Quality / Stability: Not rated (0.0) Price: Not rated (0.0)
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Avogadro CommentaryAvogadro 1.0 Will Not Launch - Version: 1.0, 10/24/2009 02:00PM PST

rowanwood
I downloaded Avogadro 1.0 and tried to run it. It refused to launch. The icon in the dock would open and immediately bounced out. Version 0.9.5 still launches properly, so I cannot blame a fault in my system.

My system:
iMac G5 (1.8 GHz), 2 GB RAM, Mac OS X 10.4.11 (fully updatred with all current patches)

Perhaps there is a problem with the software or that it requires either Mac OS X 10.5 or a different version of Python installed than the system installs by default?

Either re-state system requirements or fix the problem.

Borborygmus
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Avogadro Commentaryproblem with sourceforge link - Version: 0.9.7, 8/2/2009 06:54AM PST

KerryGinn--2008
There is a problem with the sourceforge link to the download at the moment. The download link on the developer's site is working well.
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Avogadro Usage TipFull Screen mode - Version: 0.9.0, 1/16/2009 08:06PM PST

(0 of 1 users found this comment useful)

pbays
This looks like it might be a useful tool. However, I hit full screen mode, and now cannot get out of it, even with a restart. The full screen/ normal toggle does not work.
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