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CLC Protein Workbench

CLC Protein Workbench - 4.0.1

advanced protein sequence anayses

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This Version: Not rated (0.0)
Current Version: 4.0.1
Release Date: 2008-07-10
License: Update
Downloads (this version): 470
Downloads (all versions): 7,026

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Product Description:

CLC Protein Workbench provides a wide range of advanced protein analyses, and is based on the same user-friendly and integrated software environment as CLC Free Workbench. This 2 x 2 weeks of fully functional demo includes a vast amount of advanced protein sequence analyses - all analyses are integrated in one single user-friendly and intuitive software application. Some analyses are - Integrated 3D molecular viewer - 2 types of alignments - Phylogenetics - Secondary protein structure prediction - Signal Peptide Prediction (SignalP) - Transmembrane helix prediction (TMHMM) - Motif search (known patterns) - Motif search using regular expressions - Motif search using ProSite patterns - Pattern discovery (unknown patterns) - Web based BLAST - BLAST on local databases - Batch processing of multiple analyses in one work-step - Protein family analysis (PFAM) - Dot plots - Hydrophobicity analyses - Antigenicity analyses - Searches on GenBank, Swiss-Prot, TrEMBL, and PubMed - Log of actions/analyses performed

What's new in this version:

New features
  • Scrollbars can be adjusted manually
Problems fixed
  • Fixed problems when aligning sequences with lowercase characters
  • Fixed import of trace files without quality scores
  • Fixed problem when removing location
  • A new sequence list can be created from a selection in the table view
  • User definable scrollbar areas for contig views
  • A few other minor bugs have been fixed.

Operating System Requirements:

This product is designed to run on the following operating systems:

  • Mac OS X 10.5 Intel
  • Mac OS X 10.5 PPC
  • Mac OS X 10.4 Intel
  • Mac OS X 10.4 PPC
  • Mac OS X 10.3.9
  • Mac OS X 10.3

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